2012
Quantitative proteomics in systems biology
Firczuk, H., Kannambath, S; Pahle, J; Claydon, Amy; Beynon, Robert, Duncan, John; Westerhoff, Hans; Mendes, Pedro & McCarthy, John (2013) An in vivo control map for the eukaryotic mRNA translation machinery. Mol. Sys. Biol 9: 635 [PDF] [PUBMED] [Abstract...]
Romeo, Romeo, 'whiff'-fore art thou, Romeo?
Sarah A. Roberts, Amanda J. Davidson, Lynn McLean, Robert J. Beynon, Jane L. Hurst (2012) Pheromonal Induction of Spatial Learning in Mice. Science 338, 1462-1465 [PUBMED] [PDF] [Abstract...]
Who's got the biggest workload? Analysis of chaperone abundance and workload
Brownridge P, Lawless C, Payapilly AB, Lanthaler K, Holman SW, Harman VM, Grant CM, Beynon RJ, Hubbard SJ. Quantitative analysis of chaperone network throughput in budding yeast (2012). Proteomics. 13(8) 1276-1291 [PUBMED][PDF] [Abstract...]
A degrading synthesis of proteome turnover research!
Claydon, A.C. & Beynon, R.J. (2012) Proteome dynamics: revisiting turnover with a global perspective. Mol. Cell Proteomics 11:1551-1565. [PUBMED][PDF] [Abstract...]
QconCATs for mastitis research
Bislev SL, Kusebauch U, Codrea MC, Beynon RJ, Harman VM, Røntved CM, Aebersold R, Moritz RL, Bendixen E. (2012) Quantotypic properties of QconCAT peptides targeting bovine host response to Streptococcus uberis. J Proteome Res. 11:1832-1843. [PUBMED][PDF] [Abstract...]
Dynamic sperm labelling
Claydon AJ, Ramm SA, Pennington A, Hurst JL, Stockley P, Beynon R. (2012) Heterogenous turnover of sperm and seminal vesicle proteins in the mouse revealed by dynamic metabolic labeling. Mol Cell Proteomics. 11(6):M111.014993. [PUBMED][PDF] [Abstract...]
Whole animal protein turnover studies
Claydon, A.J., Thom, M.D., Hurst, J.L. & Beynon, R.J. (2011) Protein turnover: measurement of proteome dynamics by whole animal metabolic labelling with stable isotope labelled amino acids. Proteomics 12:1194-1206 [PUBMED][PDF] [Abstract...]
Extending Progenesis to embrace SILAC and Hi3
Qi, D., Brownridge, P., Xia, D., Mackay, K., Gonzalez-Galarza, F.F., Kenyani, J., Harman, V., Beynon, R.J. & Jones, A.R. (2012) A software toolkit and interface for performing stable isotope labelling and top3 quantification using Progenesis LC-MS OMICS JIB, 2012, 16(10), (in press) [Abstract...]
Designing QconCATs for a mammalian pathway
Simpson, D.M. & Beynon, R.J. (2012) QconCATs: design and expression of concatenated protein standards for multiplexed protein quantification. Analytical and Bioanalytical Chemistry 404: 977-989 [PUBMED][PDF] [Abstract...]