Alphabetical Site Map: Use this for a forensic look at what we do. The closest thing we have to an index! Links now work as they should. Thanks LogHound
- - A -
- A Brian Cox view of proteomics
- A degrading synthesis of proteome turnover research!
- A new lipocalin, fully sequenced, from bank voles
- A points system for peer review
- A proteomics workbench?
- A-Z of the CPR site
- Absolute quantification by QconCAT
- Accessing the MASCOT server at Liverpool
- Acetone modifies peptides! Be careful if you're using acetone precipitation.
- All of our STEM activities, in one place
- Allen Po
- An unusual marsupial urinary lipocalin - vulpeculin
- Andrew Miller, MP, visits CPR
- Another new paper on glycan characterisation from Eyers team
- Asymetric equalisation with combinatorial beads
- Avian Proteomics
- - B -
- Back at the VG&M! Summer Science Club!
- Being a mass spec postdoc
- Betes Noir
- Bio Master template
- Biomarkers of ragwort poisoning in horses
- Bottom up analysis of glycosidic bond stereochemistry
- Buffer Calculator
- - C -
- Can I have a copy of XXXXX software?
- Can you measure the mass of my protein?
- Can you perform protein sequencing de novo?
- Caught in a trap - proteomics of NETS
- Cauxin in big cat urine
- CaZIP phosphorylation
- Challenging the 'MHC' hypothesis
- Chaperone networks in yeast
- Characterising proteins in scent marks
- Chris Clarke
- Claire Eyers
- Claire interviewed for Dundee alumni page
- Cochrane review of McArdle disease
- Complete de novo sequencing of a mouse lemur protein
- Complexity of RelA phosphorylation
- Connective tissue protein turnover
- Connective tissue proteomics
- Copper toxicity in sheep
- CPR Alumni [HERE]
- CPR engagement with STEM
- CPR Hosting the BBSRC Veterinary Vaccinology Network
- CPR mugs - a true collector's item
- CPR on the BBC
- CPR team wins prize at BiotechYES competition
- Cross-species proteomics
- CSF proteomics in bacterial meningitis
- - D -
- Darcin and the neural circuits it activates
- Darcin in the news
- Darcin NMR structure lodged
- Darcin paper is a ‘hidden’ jewel!
- Darcin stimulates neurogenesis
- Darcin three dimensional structure solved!
- Deep discovery of novel phosphorylation sites
- Designer genes for mass spectrometry
- Designing QconCATs for a mammalian pathway
- Detailed protein analysis of the rat MUP complex
- Discovery and definition of non-canonical phosphorylation
- Double standards in proteomics
- Dynamic SILAC for global assessment of proteome turnover
- Dynamic sperm labelling
- - E -
- Ed Emmott
- Elena Sou
- Enhanced ability in phosphosite localisation
- Enzyme turnover and metabolic regulation
- Enzymes for carbohydrate sulfation are targeted by kinase inhibitors
- Even the smallest of hamsters have lipocalins in their urine.
- Extending Progenesis to embrace SILAC and Hi3
- - F -
- Failed as a THE correspondent
- Familiarity breeds...?
- February, 2011
- First 'zap the crap', now 'Fry the fly': REIMS for insect identification
- First paper describing QconCAT
- First paper on a systematic analysis of MUP expression
- First paper on dynamic SILAC in intact animals
- FPGA acceleration of proteomics data processing
- Freemason visit to CPR
- Frequent questions
- FTICR based quantification
- FTICR resolution of similar mass proteins
- - G -
- Gallery
- Genetic programming for peptide 'flyability'
- Genetics of individual MUP variation
- Global cooling
- Global proteome quantification: dreams or reality?
- Global proteomics of carbon source metabolism in Saccharomyces
- Graduation 2010
- - H -
- Hardware accelerated proteomics
- Harry Collier
- Heparin binding proteome
- How many proteins can you detect in a typical proteomics analysis?
- How much will it cost?
- - I -
- Identification of an atypical male-specific MUP in mouse urine
- Iliyana Kaneva
- Improving the quality of turnover measurement
- Installation of our Synapt G2
- Installation of our Velos Orbitrap
- Instrument logs
- Ion mobility for glycan analysis
- Ion mobility review
- Ion mobility to evaluate ligand binding to proteins
- Iris Wagner
- Is label-free quantification the way to go?
- Isolation of N-terminal peptides
- It is a truth, universally acknowledged, that a mouse in possession of darcin must be in want of a mate.
- It is worth adding DMSO to the mobile phase?
- It's that time again - thesis submission!
- It’s all about the actors, darling!
- - J -
- Jos Harris
- Judging at the Big Bang
- Junk Mail and Spam
- - K -
- Kinases in spindle assembly
- - L -
- Label free approaches to glycan and glycoprotein analysis
- Lauren Tomlinson
- Leonard Daly
- Local Resources
- Lupe wins a Biochemical Society Outreach grant
- Lysine acetylation of histones
- - M -
- Major MRC funding for enabling technologies
- Marvellous molecules at the VG&M!
- Mass spectrometry identification of proteins
- Mass spectrometry practicals in CPR
- Maximillian Harris
- McArdle disease Cochrane systematic review
- McArdle disease treatments
- Mechanisms of kin recognition
- Metabolic labelling in proteomics
- Metabolomics in canine hepatology
- Methodology for hunting histidine phosphorylation
- MHC in scent communication
- MHC is not involved in individual recognition
- Move, Week 1
- Move, Week 2
- Move, Week 2, end
- Move, Week 3
- Move, Week 5
- MS for identification of PTMs
- MS from gels, top down or bottom up
- MUP complexity and analytical challenges
- MUP variation in lab mouse strains
- MUP variation in mouse subspecies
- MUPs advertise heterozyygosity and fitness
- MUPs and MHC in mate choice
- MUPs in an aboriginal mouse
- MUPs in individual recognition
- MUPs shape the volatile odours of mice
- Muscle proteomics
- Muscle proteomics: anabolic agent effects
- Myoblast phosphoproteomics
- - N -
- Natalie Koch
- Nefeli Boni-Kazantzidou
- New appointment and convergence of two groups
- New BBSRC ALERT 14 grant
- New BBSRC Grant to develop MS Imaging at Liverpool
- New collaboration with Brazil
- New insights into protein kinase A action
- New instrumentation
- New lab members
- New laboratory space starting!
- New members of the group
- New paper on CSF proteomics in paediatric meningitis
- New paper on glycan arrays from Eyers team
- New PhD opportunities in cell signalling and proteomics
- New preprint on the nuts and bolts of SCOPE2
- New Web Site
- News |
- News from 2005
- News from 2006
- News from 2007
- News from 2008
- News from 2009
- Nextgen QconCATs - MEERCAT!
- Norovirus mode of action
- Novel proteolytic events in SARS-Cov-2 infection
- - O -
- Occam's Razor
- Of mice, mups and mass spectrometry
- Of scripts, actors, costumes and prostheses
- Of scripts, actors, costumes and prostheses
- On catnip and mosquitoes - solving an evolutionary puzzle
- On mental arithmetic
- On reviewing
- Outreach |
- Oxidative stress and MUPs
- - P -
- Papers |
- Parasite proteomics
- Peptide map drawing tool
- Peptide mapping tool
- PFG Lab Opening
- Pheromones and contextual information.
- Philip Brownridge
- PhosphoLFQ of NF-kB/RelA in DNA damage
- Phosphorylation stoichiometry
- Piled Higher and Deeper
- Plasticity of the mouse seminal vesical fluid proteome
- Positional proteomics and MetAP-2 substrates
- Postcard from HUPO
- Poster of our work
- Pre-eclampsia biomarkers
- Prevention of proteolysis
- PRIDE Datasets
- Professor Rob Beynon, FLSW!
- Proteasome proteolysis
- Protein sulfation enzymes are targeted by kinase inhibitors
- Protein turnover in a vertebrate
- Proteome dynamics
- Proteome dynamics in a non-model species - the challenges!
- Proteome dynamics review
- Proteome plasticity in sperm competition
- Proteome turnover: why is it not being studied?
- Proteomics and animal disease
- Proteomics and animal disease
- Proteomics and genome annotation
- Proteomics and protein moonlighting
- Proteomics as a service
- Proteomics in craniopharyngioma
- Proteomics of a marine organism
- Proteomics of canine ligament progenitors
- Proteomics of copper effects in Ronaldsay sheep
- Proteomics of copper toxicity
- Proteomics of dystrophic muscle
- Proteomics of growing muscle
- Proteomics of HGF/EGF signalling
- Proteomics of hippocampus in elipepsy
- Proteomics of myeloma line in protien free medium
- Proteomics of myofibroblasts
- Proteomics of ocular cancer secretomes reveal malignancy potential
- Proteomics of oxidative stress in mice
- Proteomics of tissue samples
- Proteomics suppporting supramolecular studies
- Proteomics to identify galectin binding partners
- Proteomics: 1 Plate Tectonics: 0
- Proteostasis of heat shock
- - Q -
- QconCAT compared to label-free for plasma proteins
- QconCAT for equine acute phase proteins
- QconCAT protocols defined
- QconCATs for mastitis research
- QconCATs in equine wound healing
- Quantification of a metabolic pathway
- Quantification of proteins in the human osteoarthritic secretome
- Quantitative analysis of the yeast 'chaperome'
- Quantitative proteomics in systems biology
- - R -
- Rats have MUPs too - but different!
- Recent developments
- Redox control of protein kinases
- Regulation of Aurora A by CoASH
- Regulation of norovirus infection by Ifit1
- REIMS for the analysis of bacterial protein production
- Removal of journal titles
- Replical: engineered protein for improved proteomics workflows
- Research |
- Review of ion mobility MS for glycan sequencing
- Review of rodent urinary lipocalins
- RJB Blog
- Rob now Chair of BBSRC Strategy Panel
- Robert Beynon
- Role of CDK18 in replication stress signalling and genome stability
- Role of RNA polymerase III through proteomics
- Romeo, Romeo, 'whiff'-fore art thou, Romeo?
- Rosie Maher
- Royal Society Funding for Winstanley
- - S -
- Scent exposure influences competitive behaviour in lab mice
- Scent marks signal competitive ability
- Scent of sensecence
- Scent wars
- Schistosome parasite QconCAT
- Science Club at New Park Primary
- Secretome analysis of cancer cells
- Seminal vesicle protein evolution
- Sequential exoproteolysis is not valid as a structural probe
- Sex pheromones are not aways attractive
- Shall we rethink posters?
- SIDLS: stable isotope labelling for secretome dynamics
- Significance of animal scents in behaviour
- SILAC Phosphoproteomics
- Single cell proteomics on macrophages
- Sometimes I despair
- Speeding up proteomics with hardware computing solutions
- Sperm proteomes, gone large
- SRM data standards
- St Michael's School Fair
- STEM day at Winstanley
- Stephen wins poster prize
- Stoichiometry of histidine kinases by mass spectrometry
- Strategies for dynamic SILAC
- Structural comparison of central and peripheral mouse MUPs
- Structure and asparagine deamidation
- Synovial fluid proteomes
- - T -
- Temporal proteomics of herpes virus infection
- The avoidance of inbreeding
- The biggest absolute quantification study ever! A tale of 100 QconCATs for nearly 2,000 proteins
- The COVID-19 MS coalition
- The crates are back in town
- The end of proteomics
- The F factor! F for 'flyability'!
- The joys of running a training course!
- Tools for kinome research
- Treatment for McArdle disease
- Two new ion mobility equipped QToF Instruments from Waters
- - U -
- Unblocking the sink
- Unkind cuts - proteolysis and proteomics
- Urinary lipocalins
- Useful Links
- Using ion mobility MS to understand drug:protein interactions
- Using protemics to define MMP7 processing
- Using proteomics to explore 'pseudogene' expression
- Using proteomics to identify targets for schistosomiasis
- Using QconCATs to establish protein complex stoichiometry
- Using stable isotopes to track sperm competition
- - V -
- VG&M Summer Science Club
- Victoria acting as judge in the Big Bang North West
- Victoria Harman
- Victoria judging the Big Bang NW 2015
- - W -
- What capabilities do you have?
- What is QconCAT?
- What is the best route to contact?
- What is the lowest limit of detection you can attain?
- What's in a name
- Where to find us
- Who |
- Who are CPR?
- Who's got the biggest workload? Analysis of chaperone abundance and workload
- Whole animal protein turnover studies
- Wild mice in Zurich!
- Winstanley College Interviews
- Winstanley come to visit
- Winstanley STEM day
- - X -
- - Y -
- Yeast complex proteomics
- - Z -
- Zap the crap! Using REIMS to obtain valuable information from animal faeces