Publications
Selected publications
- Divide-and-conquer: machine-learning integrates mammalian and viral traits with network features to predict virus-mammal associations (Journal article - 2021)
- Predicting mammalian hosts in which novel coronaviruses can be generated. (Journal article - 2021)
- Integration of shared-pathogen networks and machine learning reveals the key aspects of zoonoses and predicts mammalian reservoirs. (Journal article - 2020)
2023
Features that matter: evolutionary signatures that predict viral transmission routes
Metatranscriptomics improves the laboratory diagnosis of infectious intestinal disease from human diarrhoeal samples
2022
Reply to: Machine-learning prediction of hosts of novel coronaviruses requires caution as it may affect wildlife conservation
Blagrove, M. S. C., Baylis, M., & Wardeh, M. (2022). Reply to: Machine-learning prediction of hosts of novel coronaviruses requires caution as it may affect wildlife conservation. NATURE COMMUNICATIONS, 13(1). doi:10.1038/s41467-022-32747-6
2021
One hundred years of zoonoses research in the Horn of Africa: A scoping review.
Cavalerie, L., Wardeh, M., Lebrasseur, O., Nanyingi, M., McIntyre, K. M., Kaba, M., . . . Mor, S. M. (2021). One hundred years of zoonoses research in the Horn of Africa: A scoping review.. PLoS neglected tropical diseases, 15(7), e0009607. doi:10.1371/journal.pntd.0009607
Divide-and-conquer: machine-learning integrates mammalian and viral traits with network features to predict virus-mammal associations
Wardeh, M., Blagrove, M. S. C., Sharkey, K. J., & Baylis, M. (2021). Divide-and-conquer: machine-learning integrates mammalian and viral traits with network features to predict virus-mammal associations. Nature Communications, 12(1). doi:10.1038/s41467-021-24085-w
Predicting mammalian hosts in which novel coronaviruses can be generated.
Wardeh, M., Baylis, M., & Blagrove, M. S. C. (2021). Predicting mammalian hosts in which novel coronaviruses can be generated.. Nature Communications, 12(1), 780. doi:10.1038/s41467-021-21034-5
2020
Predicting mammalian hosts in which novel coronaviruses can be generated
Wardeh, M., Baylis, M., & Blagrove, M. S. C. (2020). Predicting mammalian hosts in which novel coronaviruses can be generated. doi:10.1101/2020.06.15.151845
Divide and conquer – machine-learning integrates mammalian, viral, and network traits to predict unknown virus-mammal associations
Wardeh, M., Blagrove, M. S. C., Sharkey, K., & Baylis, M. (2020). Divide and conquer – machine-learning integrates mammalian, viral, and network traits to predict unknown virus-mammal associations. doi:10.1101/2020.06.13.150003
Distinct spread of DNA and RNA viruses among mammals amid prominent role of domestic species
Wells, K., Morand, S., Wardeh, M., & Baylis, M. (2020). Distinct spread of DNA and RNA viruses among mammals amid prominent role of domestic species. GLOBAL ECOLOGY AND BIOGEOGRAPHY, 29(3), 470-481. doi:10.1111/geb.13045
Integration of shared-pathogen networks and machine learning reveals the key aspects of zoonoses and predicts mammalian reservoirs.
Wardeh, M., Sharkey, K. J., & Baylis, M. (2020). Integration of shared-pathogen networks and machine learning reveals the key aspects of zoonoses and predicts mammalian reservoirs.. Proceedings. Biological sciences, 287(1920). doi:10.1098/rspb.2019.2882
2019
Bluetongue risk under future climates
Jones, A., Turner, J., Caminade, C. M., Heath, A., Wardeh, M., Kluiters, G., . . . Baylis, M. (2019). Bluetongue risk under future climates. Nature Climate Change, 9(2), 153-157. doi:10.1038/s41558-018-0376-6
The effect of temperature, farm density and foot-and-mouth disease restrictions on the 2007 UK bluetongue outbreak
Turner, J., Jones, A. E., Heath, A. E., Wardeh, M., Caminade, C., Kluiters, G., . . . Baylis, M. (2019). The effect of temperature, farm density and foot-and-mouth disease restrictions on the 2007 UK bluetongue outbreak. Scientific Reports, 9. doi:10.1038/s41598-018-35941-z
2018
Distinct spread of DNA and RNA viruses among mammals amid prominent role of domestic species
Wells, K., Morand, S., Wardeh, M., & Baylis, M. (2018). Distinct spread of DNA and RNA viruses among mammals amid prominent role of domestic species. doi:10.1101/421511
2017
Small animal disease surveillance: GI disease and salmonellosis
Arsevska, E., Singleton, D., Sanchez-Vizcaino, F., Williams, N., Jones, P. H., Smyth, S., . . . Davies, R. H. (2017). Small animal disease surveillance: GI disease and salmonellosis. VETERINARY RECORD, 181(9), 228-232. doi:10.1136/vr.j3642
Co-occurrence of viruses and mosquitoes at the vectors' optimal climate range: An underestimated risk to temperate regions?
Blagrove, M. S. C., Caminade, C., Waldmann, E., Sutton, E. R., Wardeh, M., & Baylis, M. (2017). Co-occurrence of viruses and mosquitoes at the vectors' optimal climate range: An underestimated risk to temperate regions?. PLoS Neglected Tropical Diseases, 11(6). doi:10.1371/journal.pntd.0005604
2016
Canine babesiosis and tick activity monitored using companion animal electronic health records in the UK
Sanchez-Vizcaino, F., Wardeh, M., Heayns, B., Singleton, D. A., Tulloch, J. S. P., McGinley, L., . . . Radford, A. D. (2016). Canine babesiosis and tick activity monitored using companion animal electronic health records in the UK. VETERINARY RECORD, 179(14). doi:10.1136/vr.103908
Small animal disease surveillance: pruritus, and coagulase-positive staphylococci
Sanchez-Vizcaino, F., Singleton, D., Jones, P. H., Heayns, B., Wardeh, M., Radford, A. D., . . . Everitt, S. (2016). Small animal disease surveillance: pruritus, and coagulase-positive staphylococci. VETERINARY RECORD, 179(14), 352-355. doi:10.1136/vr.i5322
Small animal disease surveillance: respiratory disease
Sanchez-Vizcaino, F., Jones, P. H., Menacere, T., Heayns, B., Wardeh, M., Newman, J., . . . McConnell, K. (2016). Small animal disease surveillance: respiratory disease. VETERINARY RECORD, 178(15), 361-364. doi:10.1136/vr.i1815
Using the H-index to assess disease priorities for salmon aquaculture
Murray, A. G., Wardeh, M., & McIntyre, K. M. (2016). Using the H-index to assess disease priorities for salmon aquaculture. PREVENTIVE VETERINARY MEDICINE, 126, 199-207. doi:10.1016/j.prevetmed.2016.02.007
2015
Small animal disease surveillance
Sanchez-Vizcano, F., Jones, P. H., Menacere, T., Heayns, B., Wardeh, M., Newman, J., . . . McConnell, K. (2015). Small animal disease surveillance. VETERINARY RECORD, 177(23), 591-594. doi:10.1136/vr.h6174
Database of host-pathogen and related species interactions, and their global distribution
Wardeh, M., Risley, C., McIntyre, M., Setzkorn, C., & Baylis, M. (2015). Database of host-pathogen and related species interactions, and their global distribution. Scientific Data, 2, 11 pages. doi:10.1038/sdata.2015.49
2014
Using open-access taxonomic and spatial information to create a comprehensive database for the study of Mammalian and avian livestock and pet infections
McIntyre, K. M., Setzkorn, C., Wardeh, M., Hepworth, P. J., Radford, A. D., & Baylis, M. (2014). Using open-access taxonomic and spatial information to create a comprehensive database for the study of Mammalian and avian livestock and pet infections. PREVENTIVE VETERINARY MEDICINE, 116(3), 325-335. doi:10.1016/j.prevetmed.2013.07.002
Using open-access taxonomic and spatial information to create a comprehensive database for the study of Mammalian and avian livestock and pet infections
McIntyre, K. M., Setzkorn, C., Wardeh, M., Hepworth, P. J., Radford, A. D., & Baylis, M. (2014). Using open-access taxonomic and spatial information to create a comprehensive database for the study of Mammalian and avian livestock and pet infections. Preventive Veterinary Medicine, 116(3), 325-335. doi:10.1016/j.prevetmed.2013.07.002
2013
A Comparative Study of Three Image Representations for Population Estimation Mining Using Remote Sensing Imagery
Dittakan, K., Coenen, F., Christley, R., & Wardeh, M. (2013). A Comparative Study of Three Image Representations for Population Estimation Mining Using Remote Sensing Imagery. In Unknown Conference (pp. 253-264). Springer Berlin Heidelberg. doi:10.1007/978-3-642-53914-5_22
Population Estimation Mining Using Satellite Imagery
Dittakan, K., Coenen, F., Christley, R., & Wardeh, M. (2013). Population Estimation Mining Using Satellite Imagery. In Unknown Conference (pp. 285-296). Springer Berlin Heidelberg. doi:10.1007/978-3-642-40131-2_25
Argumentation based tools for policy-making
Wardeh, M., Wyner, A., Atkinson, K., & Bench-Capon, T. (2013). Argumentation based tools for policy-making. In Proceedings of the Fourteenth International Conference on Artificial Intelligence and Law (pp. 249-250). ACM. doi:10.1145/2514601.2514640
A Comparative Study of Three Image Representations for Population Estimation Mining Using Remote Sensing Imagery
Dittakan, K., Coenen, F., Christley, R., & Wardeh, M. (2013). A Comparative Study of Three Image Representations for Population Estimation Mining Using Remote Sensing Imagery. In ADMA'13 (pp. TBA). Hangzhou, China: Springer.
2012
Multi-agent based classification using argumentation from experience
Wardeh, M., Coenen, F., & Bench-Capon, T. (2012). Multi-agent based classification using argumentation from experience. AUTONOMOUS AGENTS AND MULTI-AGENT SYSTEMS, 25(3), 447-474. doi:10.1007/s10458-012-9197-6
PISA: A framework for multiagent classification using argumentation
Wardeh, M., Coenen, F., & Capon, T. B. (2012). PISA: A framework for multiagent classification using argumentation. DATA & KNOWLEDGE ENGINEERING, 75, 34-57. doi:10.1016/j.datak.2012.03.001
A Model-Based Critique Tool for Policy Deliberation
Wyner, A., Wardeh, M., Bench-Capon, T., & Atkinson, K. (2012). A Model-Based Critique Tool for Policy Deliberation. In Legal Knowledge and Information Systems (JURIX 2012) Vol. 250 (pp. 167-176). doi:10.3233/978-1-61499-167-0-167
2011
Arguing from experience using multiple groups of agents
Wardeh, M., Bench-Capon, T., & Coenen, F. (2011). Arguing from experience using multiple groups of agents. Argument & Computation, 2(1), 51-76. doi:10.1080/19462166.2010.528176
Multi-agent Based Classification Using Argumentation from Experience
Wardeh, M., Coenen, F., Bench-Capon, T., & Wyner, A. (2011). Multi-agent Based Classification Using Argumentation from Experience. In ADVANCES IN KNOWLEDGE DISCOVERY AND DATA MINING, PT II Vol. 6635 (pp. 357-369). Retrieved from https://www.webofscience.com/
2010
Multi-Party Argument from Experience
Wardeh, M., Bench-Capon, T., & Coenen, F. (2010). Multi-Party Argument from Experience. In ARGUMENTATION IN MULTI-AGENT SYSTEMS Vol. 6057 (pp. 216-235). Retrieved from https://www.webofscience.com/
Arguing in Groups
Wardeh, M., Coenen, F., & Bench-Capon, T. (2010). Arguing in Groups. In COMPUTATIONAL MODELS OF ARGUMENT: PROCEEDINGS OF COMMA 2010 Vol. 216 (pp. 475-486). doi:10.3233/978-1-60750-619-5-475
2009
Arguing from Experience to Classifying Noisy Data
Wardeh, M., Coenen, F., & Bench-Capon, T. (2009). Arguing from Experience to Classifying Noisy Data. In DATA WAREHOUSING AND KNOWLEDGE DISCOVERY, PROCEEDINGS Vol. 5691 (pp. 354-365). Retrieved from https://www.webofscience.com/
PADUA: a protocol for argumentation dialogue using association rules
Wardeh, M., Bench-Capon, T., & Coenen, F. (2009). PADUA: a protocol for argumentation dialogue using association rules. Artificial Intelligence and Law, 17(3), 183-215. doi:10.1007/s10506-009-9078-8
Multi-Party Argument from Experience
Wardeh, M., Bench-Capon, T., & Coenen, F. P. (2009). Multi-Party Argument from Experience. In ARGMAS'09 (pp. 207-224). Budapest: AAMAS.
2008
Argument Based Moderation of Benefit Assessment
Wardeh, M., Bench-Capon, T. J. M., & Coenen, F. (2008). Argument Based Moderation of Benefit Assessment. In LEGAL KNOWLEDGE AND INFORMATION SYSTEMS Vol. 189 (pp. 128-137). doi:10.3233/978-1-58603-952-3-128
Arguments from Experience: The PADUA Protocol
Wardeh, M., Bench-Capon, T., & Coenen, F. (2008). Arguments from Experience: The PADUA Protocol. In COMPUTATIONAL MODELS OF ARGUMENT, PROCEEDINGS OF COMMA 2008 Vol. 172 (pp. 405-416). Retrieved from https://www.webofscience.com/
2007
PADUA protocol:TB Strategies and tactics
Wardeh, M., Bench-Capon, T., & Coenen, F. (2007). PADUA protocol:TB Strategies and tactics. In SYMBOLIC AND QUANTITATIVE APPROACHES TO REASONING WITH UNCERTAINTY, PROCEEDINGS Vol. 4724 (pp. 465-+). Retrieved from https://www.webofscience.com/