Research
In June 2019 I joined the Centre for Cell Imaging team at the University of Liverpool as Image Analyst and Data Steward and am also able to provide support in experimental design and execution.
Image analysis
My role is to mentor users in generating and analysing quantitative data from their images.
I provide training in the use of a variety of image analysis software including Fiji (ImageJ), Imaris, Python, Ilastik, , Zen, Knime analytics platform as well as CellProfiler. Other software support and training can be requested. I also provide custom workflows and/or scripts following a discussion about the intended image analysis aims and supply of suitable exemplary dataset(s).
In the facility, we use Omero as an image management system and I train and support users in the use of the repository.
CCI facility
I am maintaining the CCI facility website and the CCI Youtube account.