Publications
Selected publications
- The role of gene flow and chromosomal instability in shaping the bread wheat genome. (Journal article - 2021)
- CerealsDB-new tools for the analysis of the wheat genome: update 2020 (Journal article - 2020)
- VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center (Journal article - 2022)
- The Use and Limitations of Exome Capture to Detect Novel Variation in the Hexaploid Wheat Genome (Journal article - 2022)
2024
What is new in FungiDB: a web-based bioinformatics platform for omics-scale data analysis for fungal and oomycete species.
Basenko, E. Y., Shanmugasundram, A., Böhme, U., Starns, D., Wilkinson, P. A., Davison, H. R., . . . Jones, A. (2024). What is new in FungiDB: a web-based bioinformatics platform for omics-scale data analysis for fungal and oomycete species.. Genetics, iyae035. doi:10.1093/genetics/iyae035
2023
VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center in 2023.
Alvarez-Jarreta, J., Amos, B., Aurrecoechea, C., Bah, S., Barba, M., Barreto, A., . . . Zheng, J. (2023). VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center in 2023.. Nucleic acids research, gkad1003. doi:10.1093/nar/gkad1003
TriTrypDB: An integrated functional genomics resource for kinetoplastida.
Shanmugasundram, A., Starns, D., Böhme, U., Amos, B., Wilkinson, P. A., Harb, O. S., . . . Jones, A. R. (2023). TriTrypDB: An integrated functional genomics resource for kinetoplastida.. PLoS neglected tropical diseases, 17(1), e0011058. doi:10.1371/journal.pntd.0011058
2022
The Use and Limitations of Exome Capture to Detect Novel Variation in the Hexaploid Wheat Genome
Burridge, A. J., Winfield, M. O., Wilkinson, P. A., Przewieslik-Allen, A. M., Edwards, K. J., & Barker, G. L. A. (2022). The Use and Limitations of Exome Capture to Detect Novel Variation in the Hexaploid Wheat Genome. FRONTIERS IN PLANT SCIENCE, 13. doi:10.3389/fpls.2022.841855
VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center
Amos, B., Aurrecoechea, C., Barba, M., Barreto, A., Basenko, E. Y., Bazant, W., . . . Zheng, J. (2022). VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center. NUCLEIC ACIDS RESEARCH, 50(D1), D898-D911. doi:10.1093/nar/gkab929
CerealsDB: A Whistle-Stop Tour of an Open Access SNP Resource.
Winfield, M., Wilkinson, P., Burridge, A., Allen, A., Coghill, J., Waterfall, C., . . . Barker, G. (2022). CerealsDB: A Whistle-Stop Tour of an Open Access SNP Resource.. In Unknown Book (Vol. 2443, pp. 133-146). doi:10.1007/978-1-0716-2067-0_6
2021
The role of gene flow and chromosomal instability in shaping the bread wheat genome.
Przewieslik-Allen, A. M., Wilkinson, P. A., Burridge, A. J., Winfield, M. O., Dai, X., Beaumont, M., . . . Edwards, K. J. (2021). The role of gene flow and chromosomal instability in shaping the bread wheat genome. NATURE PLANTS, 7(2). doi:10.1038/s41477-020-00845-2
2020
Development of a minimal KASP marker panel for distinguishing genotypes in apple collections
Winfield, M., Burridge, A., Ordidge, M., Harper, H., Wilkinson, P., Thorogood, D., . . . Barker, G. (2020). Development of a minimal KASP marker panel for distinguishing genotypes in apple collections. PLOS ONE, 15(11). doi:10.1371/journal.pone.0242940
CerealsDB-new tools for the analysis of the wheat genome: update 2020
Wilkinson, P. A., Allen, A. M., Tyrrell, S., Wingen, L. U., Bian, X., Winfield, M. O., . . . Barker, G. L. A. (2020). CerealsDB-new tools for the analysis of the wheat genome: update 2020. Database: the journal of biological databases and curation, 2020. doi:10.1093/database/baaa060
Exploiting the genome of <i>Thinopyrum elongatum</i> to expand the gene pool of hexaploid wheat
Baker, L., Grewal, S., Yang, C. -Y., Hubbart-Edwards, S., Scholefield, D., Ashling, S., . . . King, J. (2020). Exploiting the genome of <i>Thinopyrum elongatum</i> to expand the gene pool of hexaploid wheat. THEORETICAL AND APPLIED GENETICS, 133(7), 2213-2226. doi:10.1007/s00122-020-03591-3