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2023

2022

2021

2020

2019

Similarity Regression predicts evolution of transcription factor sequence specificity

Lambert, S. A., Yang, A., Sasse, A., Cowley, G., Albu, M., Caddick, M. X., . . . Hughes, T. R. (2019). Similarity Regression predicts evolution of transcription factor sequence specificity. Nature Genetics, 51, 981-989. doi:10.1038/s41588-019-0411-1

DOI
10.1038/s41588-019-0411-1
Journal article

2017

2016

2015

3' end mRNA tagging: A novel quality control mechanism that coordinates mRNA translation and degradation

Morozov, I., & Caddick, M. X. (2015). 3' end mRNA tagging: A novel quality control mechanism that coordinates mRNA translation and degradation. INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE, 36, S29. Retrieved from https://www.webofscience.com/

Journal article

2013

Finding DNA Regulatory Motifs with Position-dependent Models

Wu, H., Wong, P. W. H., Caddick, M. X., & Sibthorp, C. (2013). Finding DNA Regulatory Motifs with Position-dependent Models. Journal of Medical and Bioengineering, 2(2), 103-109. doi:10.12720/jomb.2.2.103-109

DOI
10.12720/jomb.2.2.103-109
Journal article

2012

mRNA 3′ Tagging Is Induced by Nonsense-Mediated Decay and Promotes Ribosome Dissociation

Morozov, I. Y., Jones, M. G., Gould, P. D., Crome, V., Wilson, J. B., Hall, A. J. W., . . . Caddick, M. X. (2012). mRNA 3′ Tagging Is Induced by Nonsense-Mediated Decay and Promotes Ribosome Dissociation. MOLECULAR AND CELLULAR BIOLOGY, 32(13), 2585-2595. doi:10.1128/MCB.00316-12

DOI
10.1128/MCB.00316-12
Journal article

The GATA factors AREA and AREB together with the co-repressor NMRA, negatively regulate arginine catabolism in Aspergillus nidulans in response to nitrogen and carbon source.

Macios, M., Caddick, M. X., Weglenski, P., Scazzocchio, C., & Dzikowska, A. (2012). The GATA factors AREA and AREB together with the co-repressor NMRA, negatively regulate arginine catabolism in Aspergillus nidulans in response to nitrogen and carbon source.. Fungal genetics and biology : FG & B, 49(3), 189-198. doi:10.1016/j.fgb.2012.01.004

DOI
10.1016/j.fgb.2012.01.004
Journal article

Cytoplasmic mRNA 3' tagging in eukaryotes: Does it spell the end?

Morozov, I. Y., & Caddick, M. (2012). Cytoplasmic mRNA 3' tagging in eukaryotes: Does it spell the end?. Unknown Journal, 1.

Journal article

2011

Title: Characterisation of AnBEST1, a functional anion channel in the plasma membrane of the filamentous fungus, Aspergillus nidulans

Roberts, S. K., Milnes, J., & Caddick, M. (2011). Title: Characterisation of AnBEST1, a functional anion channel in the plasma membrane of the filamentous fungus, Aspergillus nidulans. FUNGAL GENETICS AND BIOLOGY, 48(9), 928-938.

Journal article

2010

The bZIP Transcription Factor MeaB Mediates Nitrogen Metabolite Repression at Specific Loci

Wagner, D., Schmeinck, A., Mos, M., Morozov, I. Y., Caddick, M. X., & Tudzynski, B. (2010). The bZIP Transcription Factor MeaB Mediates Nitrogen Metabolite Repression at Specific Loci. Eukaryotic Cell, 9(10), 1588-1601. doi:10.1128/ec.00146-10

DOI
10.1128/ec.00146-10
Journal article

The bZIP transcription factor MeaB mediates nitrogen metabolite repression at specific loci.

Wagner, D., Schmeinck, A., Mos, M., Morozov, I. Y., Caddick, M. X., & Tudzynski, B. (2010). The bZIP transcription factor MeaB mediates nitrogen metabolite repression at specific loci.. Eukaryotic cell, 9(10), 1588-1601. doi:10.1128/ec.00146-10

DOI
10.1128/ec.00146-10
Journal article

Blue Skies, Green Fields

Caddick, M. X. (2010). Blue Skies, Green Fields. Public Service Review: UK Science and Technology, 1, 72.

Journal article

CUCU Modification of mRNA Promotes Decapping and Transcript Degradation in <i>Aspergillus nidulans</i>

Morozov, I. Y., Jones, M. G., Razak, A. A., Rigden, D. J., & Caddick, M. X. (2010). CUCU Modification of mRNA Promotes Decapping and Transcript Degradation in <i>Aspergillus nidulans</i>. MOLECULAR AND CELLULAR BIOLOGY, 30(2), 460-469. doi:10.1128/MCB.00997-09

DOI
10.1128/MCB.00997-09
Journal article

Distinct roles for Caf1, Ccr4, Edc3 and CutA in the co-ordination of transcript deadenylation, decapping and P-body formation in <i>Aspergillus nidulans</i>

Morozov, I. Y., Jones, M. G., Spiller, D. G., Rigden, D. J., Dattenboeck, C., Novotny, R., . . . Caddick, M. X. (2010). Distinct roles for Caf1, Ccr4, Edc3 and CutA in the co-ordination of transcript deadenylation, decapping and P-body formation in <i>Aspergillus nidulans</i>. MOLECULAR MICROBIOLOGY, 76(2), 503-516. doi:10.1111/j.1365-2958.2010.07118.x

DOI
10.1111/j.1365-2958.2010.07118.x
Journal article

mRNA stability and its role in biomedical sciences

Morozov, I., & Caddick, M. X. (2010). mRNA stability and its role in biomedical sciences. Int J Mol Med, 26, s24.

Journal article

2007

Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88.

Pel, H. J., de Winde, J. H., Archer, D. B., Dyer, P. S., Hofmann, G., Schaap, P. J., . . . Stam, H. (2007). Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88.. Nature biotechnology, 25(2), 221-231. doi:10.1038/nbt1282

DOI
10.1038/nbt1282
Journal article

Applications of Inducible Transcription in Plant Research and Biotechnology

Tomsett, B., Tregova, A., & Caddick, M. (n.d.). Applications of Inducible Transcription in Plant Research and Biotechnology. In Unknown Book (pp. 309-328). Wiley. doi:10.1002/9781119312994.apr0308

DOI
10.1002/9781119312994.apr0308
Chapter

Gene regulation

Caddick, M. X., & Dobson, C. (2007). Gene regulation. In G. Goldman, & S. Osmani (Eds.), The Aspergilli: Genomics, Medical Applications, Biotechnology, and Research Methods. (pp. 153-161). New York: CRC Press.

Chapter

2006

Opposing signals differentially regulate transcript stability in Aspergillus nidulans.

Caddick, M. X., Jones, M. G., van Tonder, J. M., Le Cordier, H., Narendja, F., Strauss, J., & Morozov, I. Y. (2006). Opposing signals differentially regulate transcript stability in Aspergillus nidulans.. Molecular microbiology, 62(2), 509-519. doi:10.1111/j.1365-2958.2006.05383.x

DOI
10.1111/j.1365-2958.2006.05383.x
Journal article

Gene regulation in Aspergillus: From genetics to genomics.

Caddick, M. X., Dobson, C., Morozov, I. Y., & Jones, M. G. (2006). Gene regulation in Aspergillus: From genetics to genomics.. Medical mycology, 44(Supplement_1), S13-S16. doi:10.1080/13693780600835781

DOI
10.1080/13693780600835781
Journal article

The GATA factor AreA regulates localization and in vivo binding site occupancy of the nitrate activator NirA.

Berger, H., Pachlinger, R., Morozov, I., Goller, S., Narendja, F., Caddick, M., & Strauss, J. (2006). The GATA factor AreA regulates localization and in vivo binding site occupancy of the nitrate activator NirA.. Molecular microbiology, 59(2), 433-446. doi:10.1111/j.1365-2958.2005.04957.x

DOI
10.1111/j.1365-2958.2005.04957.x
Journal article

2005

Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae.

Galagan, J. E., Calvo, S. E., Cuomo, C., Ma, L. -J., Wortman, J. R., Batzoglou, S., . . . Birren, B. W. (2005). Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae.. Nature, 438(7071), 1105-1115. doi:10.1038/nature04341

DOI
10.1038/nature04341
Journal article

The alc-GR system: a modified alc gene switch designed for use in plant tissue culture.

Roberts, G. R., Garoosi, G. A., Koroleva, O., Ito, M., Laufs, P., Leader, D. J., . . . Tomsett, A. B. (2005). The alc-GR system: a modified alc gene switch designed for use in plant tissue culture.. Plant physiology, 138(3), 1259-1267. doi:10.1104/pp.105.059659

DOI
10.1104/pp.105.059659
Journal article

Characterization of the ethanol-inducible alc gene expression system in tomato.

Garoosi, G. A., Salter, M. G., Caddick, M. X., & Tomsett, A. B. (2005). Characterization of the ethanol-inducible alc gene expression system in tomato.. Journal of experimental botany, 56(416), 1635-1642. doi:10.1093/jxb/eri159

DOI
10.1093/jxb/eri159
Journal article

2004

Nitrogen Regulation in Mycelial Fungi

Caddick, M. X. (2004). Nitrogen Regulation in Mycelial Fungi. In Biochemistry and Molecular Biology (pp. 349-368). Springer Berlin Heidelberg. doi:10.1007/978-3-662-06064-3_17

DOI
10.1007/978-3-662-06064-3_17
Chapter

2003

A polyketide synthase gene required for ochratoxin A biosynthesis in Aspergillus ochraceus.

O'Callaghan, J., Caddick, M. X., & Dobson, A. D. W. (2003). A polyketide synthase gene required for ochratoxin A biosynthesis in Aspergillus ochraceus.. Microbiology (Reading, England), 149(Pt 12), 3485-3491. doi:10.1099/mic.0.26619-0

DOI
10.1099/mic.0.26619-0
Journal article

Re: Watts et al. Proteins 2002;48:161-168.

Arst, H. N., Nicholas, H. B., & Caddick, M. X. (2003). Re: Watts et al. Proteins 2002;48:161-168.. Proteins, 52(2), 125-128. doi:10.1002/prot.10447

DOI
10.1002/prot.10447
Journal article

Differential expression of cold- and diet-specific genes encoding two carp liver delta 9-acyl-CoA desaturase isoforms.

Polley, S. D., Tiku, P. E., Trueman, R. T., Caddick, M. X., Morozov, I. Y., & Cossins, A. R. (2003). Differential expression of cold- and diet-specific genes encoding two carp liver delta 9-acyl-CoA desaturase isoforms.. American journal of physiology. Regulatory, integrative and comparative physiology, 284(1), R41-R50. doi:10.1152/ajpregu.00263.2002

DOI
10.1152/ajpregu.00263.2002
Journal article

2002

The role of desaturases in cold-induced lipid restructuring

Cossins, A. R., Murray, P. A., Gracey, A. Y., Logue, J., Polley, S., Caddick, M., . . . Maclean, N. (2002). The role of desaturases in cold-induced lipid restructuring. BIOCHEMICAL SOCIETY TRANSACTIONS, 30, 1082-1086. doi:10.1042/bst0301082

DOI
10.1042/bst0301082
Journal article

The role of desaturases in cold-induced lipid restructuring

Cossins, A. R., Murray, P. A., Gracey, A. Y., Logue, J., Polley, S., Caddick, M., . . . Maclean, N. (2002). The role of desaturases in cold-induced lipid restructuring. BIOCHEMICAL SOCIETY TRANSACTIONS, 30, 1082-1086 Part 6.

Journal article

2001

Characterization of nitrogen metabolite signalling in <i>Aspergillus</i> via the regulated degradation of <i>areA</i> mRNA

Morozov, I. Y., Galbis‐Martinez, M., Jones, M. G., & Caddick, M. X. (2001). Characterization of nitrogen metabolite signalling in <i>Aspergillus</i> via the regulated degradation of <i>areA</i> mRNA. Molecular Microbiology, 42(1), 269-277. doi:10.1046/j.1365-2958.2001.02636.x

DOI
10.1046/j.1365-2958.2001.02636.x
Journal article

Characterization of nitrogen metabolite signalling in Aspergillus via the regulated degradation of areA mRNA.

Morozov, I. Y., Galbis-Martinez, M., Jones, M. G., & Caddick, M. X. (2001). Characterization of nitrogen metabolite signalling in Aspergillus via the regulated degradation of areA mRNA.. Molecular microbiology, 42(1), 269-277. doi:10.1046/j.1365-2958.2001.02636.x

DOI
10.1046/j.1365-2958.2001.02636.x
Journal article

The Aspergillus nidulans GATA transcription factor gene areB encodes at least three proteins and features three classes of mutation.

Conlon, H., Zadra, I., Haas, H., Arst, H. N., Jones, M. G., & Caddick, M. X. (2001). The Aspergillus nidulans GATA transcription factor gene areB encodes at least three proteins and features three classes of mutation.. Molecular microbiology, 40(2), 361-375. doi:10.1046/j.1365-2958.2001.02399.x

DOI
10.1046/j.1365-2958.2001.02399.x
Journal article

The<i>Aspergillus nidulans</i>GATA transcription factor gene<i>areB</i>encodes at least three proteins and features three classes of mutation

Conlon, H., Zadra, I., Haas, H., Arst, H. N., Jones, M. G., & Caddick, M. X. (2001). The<i>Aspergillus nidulans</i>GATA transcription factor gene<i>areB</i>encodes at least three proteins and features three classes of mutation. Molecular Microbiology, 40(2), 361-375. doi:10.1046/j.1365-2958.2001.02399.x

DOI
10.1046/j.1365-2958.2001.02399.x
Journal article

Characterization of the ethanol-inducible alc gene-expression system in Arabidopsis thaliana

Roslan, H. A., Salter, M. G., Wood, C. D., White, M. R. H., Croft, K. P., Robson, F., . . . Caddick, M. X. (2001). Characterization of the ethanol-inducible alc gene-expression system in Arabidopsis thaliana. Plant Journal, 28(2), 225-235.

Journal article

Evaluating low level sequence identities - Are Aspergillus QUTA and AROM homologous?

Nicholas, H. B., Arst, H. N., & Caddick, M. X. (2001). Evaluating low level sequence identities - Are Aspergillus QUTA and AROM homologous?. European Journal Of Biochemistry, 268(2), 414-419.

Journal article

2000

Thermal thresholds of lipid restructuring and Δ<SUP>9</SUP>-desaturase expression in the liver of carp (<i>Cyprinus</i> <i>carpio</i> L.)

Trueman, R. J., Tiku, P. E., Caddick, M. X., & Cossins, A. R. (2000). Thermal thresholds of lipid restructuring and Δ<SUP>9</SUP>-desaturase expression in the liver of carp (<i>Cyprinus</i> <i>carpio</i> L.). JOURNAL OF EXPERIMENTAL BIOLOGY, 203(3), 641-650. Retrieved from https://www.webofscience.com/

Journal article