Publications
2025
Measuring CO<sub>2</sub> assimilation of Arabidopsis thaliana whole plants and seedlings.
Brazel, A. J., Manoj, N. S., Turck, F., & Ó'Maoiléidigh, D. S. (2025). Measuring CO<sub>2</sub> assimilation of Arabidopsis thaliana whole plants and seedlings.. Plant science : an international journal of experimental plant biology, 350, 112295. doi:10.1016/j.plantsci.2024.112295
2021
Systematic analyses of the <i>MIR172</i> family members of <i>Arabidopsis</i> define their distinct roles in regulation of <i>APETALA2</i> during floral transition
O'Maoileidigh, D. S., van Driel, A. D., Singh, A., Sang, Q., Le Bec, N., Vincent, C., . . . Coupland, G. (2021). Systematic analyses of the <i>MIR172</i> family members of <i>Arabidopsis</i> define their distinct roles in regulation of <i>APETALA2</i> during floral transition. PLOS BIOLOGY, 19(2). doi:10.1371/journal.pbio.3001043
Expression of <i>KNUCKLES</i> in the Stem Cell Domain Is Required for Its Function in the Control of Floral Meristem Activity in <i>Arabidopsis</i>
Kwasniewska, K., Breathnach, C., Fitzsimons, C., Goslin, K., Thomson, B., Beegan, J., . . . Wellmer, F. (2021). Expression of <i>KNUCKLES</i> in the Stem Cell Domain Is Required for Its Function in the Control of Floral Meristem Activity in <i>Arabidopsis</i>. FRONTIERS IN PLANT SCIENCE, 12. doi:10.3389/fpls.2021.704351
2019
The Same But Different: CoMoVa, an Algorithm to Identify Functional Variation in <i>Cis</i> Regulatory Elements
O'Maoileidigh, D. S. (2019). The Same But Different: CoMoVa, an Algorithm to Identify Functional Variation in <i>Cis</i> Regulatory Elements. PLANT CELL, 31(11), 2546-2547. doi:10.1105/tpc.19.00676
The White Stripes Featuring ALBOSTRIANS, a Chloroplast-Localized CCT Domain Protein.
Ó'Maoiléidigh, D. (2019). The White Stripes Featuring ALBOSTRIANS, a Chloroplast-Localized CCT Domain Protein.. The Plant cell, 31(7), 1418-1419. doi:10.1105/tpc.19.00289
A Growing Reputation for FRUITFULL Genes
O'Maoileidigh, D. S. (2019). A Growing Reputation for <i>FRUITFULL</i> Genes. PLANT CELL, 31(6), 1220-1221. doi:10.1105/tpc.19.00194
Photosynthetic activity of reproductive organs
Brazel, A. J., & O'Maoileidigh, D. S. (2019). Photosynthetic activity of reproductive organs. JOURNAL OF EXPERIMENTAL BOTANY, 70(6), 1737-1753. doi:10.1093/jxb/erz033
2018
Floral homeotic proteins modulate the genetic program for leaf development to suppress trichome formation in flowers.
Ó'Maoiléidigh, D. S., Stewart, D., Zheng, B., Coupland, G., & Wellmer, F. (2018). Floral homeotic proteins modulate the genetic program for leaf development to suppress trichome formation in flowers.. Development (Cambridge, England), 145(3), 0. doi:10.1242/dev.157784
A Conserved Mechanism to Terminate Floral Meristems
O'Maoileidigh, D. S. (2018). A Conserved Mechanism to Terminate Floral Meristems. PLANT CELL, 30(2), 260. doi:10.1105/tpc.18.00054
2017
Intrafamily Protein Interactions Contribute to DNA Localization
O'Maoileidigh, D. S. (2017). Intrafamily Protein Interactions Contribute to DNA Localization. PLANT CELL, 29(9), 2076-2077. doi:10.1105/tpc.17.00735
Transcription Factor Interplay between LEAFY and APETALA1/CAULIFLOWER during Floral Initiation
Goslin, K., Zheng, B., Serrano-Mislata, A., Rae, L., Ryan, P. T., Kwasniewska, K., . . . Graciet, E. (2017). Transcription Factor Interplay between LEAFY and APETALA1/CAULIFLOWER during Floral Initiation. PLANT PHYSIOLOGY, 174(02), 1097-1109. doi:10.1104/pp.17.00098
2016
Post-embryonic Hourglass Patterns Mark Ontogenetic Transitions in Plant Development
Drost, H. -G., Bellstaedt, J., O'Maoileidigh, D. S., Silva, A. T., Gabel, A., Weinholdt, C., . . . Quint, M. (2016). Post-embryonic Hourglass Patterns Mark Ontogenetic Transitions in Plant Development. Molecular Biology and Evolution, 33(5), 1158-1163. doi:10.1093/molbev/msw039
Strategies for Performing Dynamic Gene Perturbation Experiments in Flowers
Ó’Maoiléidigh, D., Graciet, E., & Wellmer, F. (2016). Strategies for Performing Dynamic Gene Perturbation Experiments in Flowers. BIO-PROTOCOL, 6(7). doi:10.21769/bioprotoc.1774
2015
Gene network analysis of Arabidopsis thaliana flower development through dynamic gene perturbations
O'Maoileidigh, D. S., Thomson, B., Raganelli, A., Wuest, S. E., Ryan, P. T., Kwasniewska, K., . . . Wellmer, F. (2015). Gene network analysis of Arabidopsis thaliana flower development through dynamic gene perturbations. PLANT JOURNAL, 83(2), 344-358. doi:10.1111/tpj.12878
Patterns of gene expression during <i>Arabidopsis</i> flower development from the time of initiation to maturation
Ryan, P. T., O'Maoileidigh, D. S., Drost, H. -G., Kwasniewska, K., Gabel, A., Grosse, I., . . . Wellmer, F. (2015). Patterns of gene expression during <i>Arabidopsis</i> flower development from the time of initiation to maturation. BMC GENOMICS, 16. doi:10.1186/s12864-015-1699-6
2014
Dynamics of chromatin accessibility and gene regulation by MADS-domain transcription factors in flower development
Pajoro, A., Madrigal, P., Muino, J. M., Tomas Matus, J., Jin, J., Mecchia, M. A., . . . Kaufmann, K. (2014). Dynamics of chromatin accessibility and gene regulation by MADS-domain transcription factors in flower development. GENOME BIOLOGY, 15(3). doi:10.1186/gb-2014-15-3-r41
A floral induction system for the study of early Arabidopsis flower development.
O'Maoiléidigh, D. S., & Wellmer, F. (2014). A floral induction system for the study of early Arabidopsis flower development.. Methods in molecular biology (Clifton, N.J.), 1110, 307-314. doi:10.1007/978-1-4614-9408-9_16
Gene networks controlling <i>Arabidopsis thaliana</i> flower development
O'Maoileidigh, D. S., Graciet, E., & Wellmer, F. (2014). Gene networks controlling <i>Arabidopsis thaliana</i> flower development. NEW PHYTOLOGIST, 201(1), 16-30. doi:10.1111/nph.12444
Genetic Control of <i>Arabidopsis</i> Flower Development
O'Maoileidigh, D. S., Graciet, E., & Wellmer, F. (2014). Genetic Control of <i>Arabidopsis</i> Flower Development. In MOLECULAR GENETICS OF FLORAL TRANSITION AND FLOWER DEVELOPMENT (Vol. 72, pp. 159-190). doi:10.1016/B978-0-12-417162-6.00006-7
Next-generation sequencing applied to flower development: ChIP-Seq.
Graciet, E., O'Maoiléidigh, D. S., & Wellmer, F. (2014). Next-generation sequencing applied to flower development: ChIP-Seq.. Methods in molecular biology (Clifton, N.J.), 1110, 413-429. doi:10.1007/978-1-4614-9408-9_24
2013
Control of reproductive floral organ identity specification in Arabidopsis by the C function regulator AGAMOUS.
ÓMaoiléidigh, D. S., Wuest, S. E., Rae, L., Raganelli, A., Ryan, P. T., Kwasniewska, K., . . . Wellmer, F. (2013). Control of reproductive floral organ identity specification in Arabidopsis by the C function regulator AGAMOUS.. The Plant cell, 25(7), 2482-2503. doi:10.1105/tpc.113.113209
2012
Molecular basis for the specification of floral organs by APETALA3 and PISTILLATA.
Wuest, S. E., O'Maoileidigh, D. S., Rae, L., Kwasniewska, K., Raganelli, A., Hanczaryk, K., . . . Wellmer, F. (2012). Molecular basis for the specification of floral organs by APETALA3 and PISTILLATA.. Proceedings of the National Academy of Sciences of the United States of America, 109(33), 13452-13457. doi:10.1073/pnas.1207075109
2009
The N-end rule pathway controls multiple functions during Arabidopsis shoot and leaf development.
Graciet, E., Walter, F., Ó'Maoiléidigh, D. S., Pollmann, S., Meyerowitz, E. M., Varshavsky, A., & Wellmer, F. (2009). The N-end rule pathway controls multiple functions during Arabidopsis shoot and leaf development.. Proceedings of the National Academy of Sciences of the United States of America, 106(32), 13618-13623. doi:10.1073/pnas.0906404106