Publications
2025
Correction: Metabolic response of Klebsiella oxytoca to ciprofloxacin exposure: a metabolomics approach.
Ahmed, S., Shams, S., Trivedi, D., Lima, C., McGalliard, R., Parry, C. M., . . . Goodacre, R. (2025). Correction: Metabolic response of Klebsiella oxytoca to ciprofloxacin exposure: a metabolomics approach.. Metabolomics : Official journal of the Metabolomic Society, 21(2), 38. doi:10.1007/s11306-025-02234-2
Application of infrared spectroscopy to study carbon-deuterium kinetics and isotopic spectral shifts at the single-cell level.
Shams, S., Ahmed, S., Smaje, D., Tengsuttiwat, T., Lima, C., Goodacre, R., & Muhamadali, H. (2025). Application of infrared spectroscopy to study carbon-deuterium kinetics and isotopic spectral shifts at the single-cell level.. Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy, 327, 125374. doi:10.1016/j.saa.2024.125374
2024
Metabolic response of Klebsiella oxytoca to ciprofloxacin exposure: a metabolomics approach.
Ahmed, S., Shams, S., Trivedi, D., Lima, C., McGalliard, R., Parry, C. M., . . . Goodacre, R. (2024). Metabolic response of Klebsiella oxytoca to ciprofloxacin exposure: a metabolomics approach.. Metabolomics : Official journal of the Metabolomic Society, 21(1), 8. doi:10.1007/s11306-024-02206-y
Serum metabolomics identifies unique inflammatory signatures to distinguish rheumatoid arthritis responders and non-responders to TNF inhibitor therapy
Rapid Classification and Differentiation of Sepsis-Related Pathogens Using FT-IR Spectroscopy.
Ahmed, S., Albahri, J., Shams, S., Sosa-Portugal, S., Lima, C., Xu, Y., . . . Goodacre, R. (2024). Rapid Classification and Differentiation of Sepsis-Related Pathogens Using FT-IR Spectroscopy.. Microorganisms, 12(7), 1415. doi:10.3390/microorganisms12071415
An optical photothermal infrared investigation of lymph nodal metastases of oral squamous cell carcinoma.
Al Jedani, S., Lima, C., Smith, C. I., Gunning, P. J., Shaw, R. J., Barrett, S. D., . . . Weightman, P. (2024). An optical photothermal infrared investigation of lymph nodal metastases of oral squamous cell carcinoma.. Scientific reports, 14(1), 16050. doi:10.1038/s41598-024-66977-z
Using surface-enhanced Raman scattering for simultaneous multiplex detection and quantification of thiols associated to axillary malodour.
Colleran, A., Lima, C., Xu, Y., Millichope, A., Murray, S., & Goodacre, R. (2024). Using surface-enhanced Raman scattering for simultaneous multiplex detection and quantification of thiols associated to axillary malodour.. The Analyst. doi:10.1039/d4an00762j
Life on Earth can grow on extraterrestrial organic carbon.
Waajen, A. C., Lima, C., Goodacre, R., & Cockell, C. S. (2024). Life on Earth can grow on extraterrestrial organic carbon.. Scientific reports, 14(1), 3691. doi:10.1038/s41598-024-54195-6
2023
Monitoring Phenotype Heterogeneity at the Single-Cell Level within <i>Bacillus</i> Populations Producing Poly-3-hydroxybutyrate by Label-Free Super-resolution Infrared Imaging.
Lima, C., Muhamadali, H., & Goodacre, R. (2023). Monitoring Phenotype Heterogeneity at the Single-Cell Level within <i>Bacillus</i> Populations Producing Poly-3-hydroxybutyrate by Label-Free Super-resolution Infrared Imaging.. Analytical chemistry, 95(48), 17733-17740. doi:10.1021/acs.analchem.3c03595
Focusing Ion Funnel-assisted Ambient Electrospray enables High-Density and Uniform Deposition of Non-spherical Gold Nanoparticles for Highly Sensitive Surface-enhanced Raman Scattering
Akbali, B., Boisdon, C., Smith, B., Chaisrikhwun, B., Wongravee, K., Vilaivan, T., . . . Maher, S. (2023). Focusing Ion Funnel-assisted Ambient Electrospray enables High-Density and Uniform Deposition of Non-spherical Gold Nanoparticles for Highly Sensitive Surface-enhanced Raman Scattering. The Analyst. doi:10.1039/d3an01021j
Rapid detection and quantification of paracetamol and its major metabolites using surface enhanced Raman scattering
AlMasoud, N., Alomar, T. S., Xu, Y., Lima, C., & Goodacre, R. (2023). Rapid detection and quantification of paracetamol and its major metabolites using surface enhanced Raman scattering. ANALYST, 148(8), 1805-1814. doi:10.1039/d3an00249g
Monitoring glucose levels in urine using FTIR spectroscopy combined with univariate and multivariate statistical methods
Caixeta, D. C., Lima, C., Xu, Y., Guevara-Vega, M., Espindola, F. S., Goodacre, R., . . . Sabino-Silva, R. (2023). Monitoring glucose levels in urine using FTIR spectroscopy combined with univariate and multivariate statistical methods. SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 290. doi:10.1016/j.saa.2022.122259
Raman analysis of inverse vulcanised polymers
Dodd, L. J., Lima, C., Costa-Milan, D., Neale, A. R., Saunders, B., Zhang, B., . . . Hasell, T. (2023). Raman analysis of inverse vulcanised polymers. POLYMER CHEMISTRY, 14(12), 1369-1386. doi:10.1039/d2py01408d
Optical photothermal infrared spectroscopy: A novel solution for rapid identification of antimicrobial resistance at the single-cell level <i>via</i> deuterium isotope labeling
Shams, S., Lima, C., Xu, Y., Ahmed, S., Goodacre, R., & Muhamadali, H. (2023). Optical photothermal infrared spectroscopy: A novel solution for rapid identification of antimicrobial resistance at the single-cell level <i>via</i> deuterium isotope labeling. FRONTIERS IN MICROBIOLOGY, 14. doi:10.3389/fmicb.2023.1077106
Optical Photothermal IR Spectroscopy Targets Single-Cell Metabolomics
Lima, C., & Goodacre, R. (2023). Optical Photothermal IR Spectroscopy Targets Single-Cell Metabolomics. Biophotonics International, 30(1), 38-42.
2022
Simultaneous Multiplexed Quantification of Banned Sudan Dyes Using Surface Enhanced Raman Scattering and Chemometrics
Alomar, T. S., AlMasoud, N., Xu, Y., Lima, C., Akbali, B., Maher, S., & Goodacre, R. (n.d.). Simultaneous Multiplexed Quantification of Banned Sudan Dyes Using Surface Enhanced Raman Scattering and Chemometrics. Sensors, 22(20), 7832. doi:10.3390/s22207832
Optical photothermal infrared spectroscopy can differentiate equine osteoarthritic plasma extracellular vesicles from healthy controls
Clarke, E. J., Lima, C., Anderson, J. R., Castanheira, C., Beckett, A., James, V., . . . Peffers, M. J. (2022). Optical photothermal infrared spectroscopy can differentiate equine osteoarthritic plasma extracellular vesicles from healthy controls. ANALYTICAL METHODS. doi:10.1039/d2ay00779g
Simultaneous Raman and infrared spectroscopy: a novel combination for studying bacterial infections at the single cell level
Lima, C., Ahmed, S., Xu, Y., Muhamadali, H., Parry, C., McGalliard, R. J., . . . Goodacre, R. (2022). Simultaneous Raman and infrared spectroscopy: a novel combination for studying bacterial infections at the single cell level. CHEMICAL SCIENCE. doi:10.1039/d2sc02493d
Simultaneous Raman and Infrared Spectroscopy of Stable Isotope Labelled <i>Escherichia coli</i>
Lima, C., Muhamadali, H., & Goodacre, R. (2022). Simultaneous Raman and Infrared Spectroscopy of Stable Isotope Labelled <i>Escherichia coli</i>. SENSORS, 22(10). doi:10.3390/s22103928
NOVEL SPECTROSCOPY TECHNIQUES USED TO INTERROGATE EQUINE OSTEOARTHRITIC EXTRACELLULAR VESICLES
Clarke, E. J., Lima, C., Anderson, J. R., Castanheira, C., Hyett, J., Goodacre, R., & Peffers, M. J. (2022). NOVEL SPECTROSCOPY TECHNIQUES USED TO INTERROGATE EQUINE OSTEOARTHRITIC EXTRACELLULAR VESICLES. OSTEOARTHRITIS AND CARTILAGE, 30, S95-S96. Retrieved from https://www.webofscience.com/
2021
Bioactive glass/poloxamer 407 hydrogel composite as a drug delivery system: The interplay between glass dissolution and drug release kinetics
Borges, R., Kai, K. C., Lima, C. A., Zezell, D. M., de Araujo, D. R., & Marchi, J. (2021). Bioactive glass/poloxamer 407 hydrogel composite as a drug delivery system: The interplay between glass dissolution and drug release kinetics. COLLOIDS AND SURFACES B-BIOINTERFACES, 206. doi:10.1016/j.colsurfb.2021.111934
Spectral artefacts induced by moving targets in live hyperspectral stimulated Raman spectroscopy: the case of lipid droplets in yeast cells
Lima, C., Theron, C. W., Muhamadali, H., Kell, D. B., & Goodacre, R. (2021). Spectral artefacts induced by moving targets in live hyperspectral stimulated Raman spectroscopy: the case of lipid droplets in yeast cells. Clinical Spectroscopy, 100014. doi:10.1016/j.clispe.2021.100014
The Role of Raman Spectroscopy Within Quantitative Metabolomics
Lima, C., Muhamadali, H., & Goodacre, R. (2021). The Role of Raman Spectroscopy Within Quantitative Metabolomics. Annual Review of Analytical Chemistry, 14(1). doi:10.1146/annurev-anchem-091420-092323
Review of life science applications using submicron O-PTIR and simultaneous Raman microscopy: a new paradigm in vibrational spectroscopy
Kansiz, M., Spadea, A., Nallala, J., Lima, C., Muhamadali, H., Denbigh, J., . . . Klementieva, O. (2021). Review of life science applications using submicron O-PTIR and simultaneous Raman microscopy: a new paradigm in vibrational spectroscopy. In G. J. Simpson, J. -X. Cheng, & W. Min (Eds.), Advanced Chemical Microscopy for Life Science and Translational Medicine 2021 (pp. 10). SPIE. doi:10.1117/12.2578662
Discrimination of bacteria using whole organism fingerprinting: the utility of modern physicochemical techniques for bacterial typing
AlMasoud, N., Muhamadali, H., Chisanga, M., AlRabiah, H., Lima, C. A., & Goodacre, R. (2021). Discrimination of bacteria using whole organism fingerprinting: the utility of modern physicochemical techniques for bacterial typing. ANALYST, 146(3), 770-788. doi:10.1039/d0an01482f
Imaging Isotopically Labeled Bacteria at the Single-Cell Level Using High-Resolution Optical Infrared Photothermal Spectroscopy.
Lima, C., Muhamadali, H., Xu, Y., Kansiz, M., & Goodacre, R. (2021). Imaging Isotopically Labeled Bacteria at the Single-Cell Level Using High-Resolution Optical Infrared Photothermal Spectroscopy.. Analytical chemistry. doi:10.1021/acs.analchem.0c03967
2020
Monitoring the Progress and Healing Status of Burn Wounds Using Infrared Spectroscopy
Castro, P. A. A., Lima, C. A., Morais, M. R. P. T., Zorn, T. M. T., & Zezell, D. M. (2020). Monitoring the Progress and Healing Status of Burn Wounds Using Infrared Spectroscopy. APPLIED SPECTROSCOPY, 74(7), 758-766. doi:10.1177/0003702820919446
Assessment of transdermal delivery of topical compounds in skin scarring using a novel combined approach of Raman spectroscopy and HPLC.
Basson, R., Lima, C., Muhamadali, H., Li, W., Hollywood, K., Li, L., . . . Bayat, A. (2020). Assessment of transdermal delivery of topical compounds in skin scarring using a novel combined approach of Raman spectroscopy and HPLC.. Adv Wound Care (New Rochelle). doi:10.1089/wound.2020.1154
2019
Assessing the spectrochemical signatures of skin components using FTIR microspectroscopy
Lima, C. A., Correa, L., Byrne, H. J., & Zezell, D. (2019). Assessing the spectrochemical signatures of skin components using FTIR microspectroscopy. In J. Q. Brown, & T. G. van Leeuwen (Eds.), Clinical and Preclinical Optical Diagnostics II (pp. 27). SPIE. doi:10.1117/12.2527137
Skin cancer diagnosis using infrared microspectroscopy imaging as a molecular pathology tool
Lima, C. A. (n.d.). Skin cancer diagnosis using infrared microspectroscopy imaging as a molecular pathology tool. doi:10.11606/t.85.2019.tde-05062019-155251
Using Optical Attenuation Coefficient to Monitor the Efficacy of Fluoride and Nd:YAG Laser to Control Dentine Erosion
Dias-Moraes, M. C., Lima, C. A., Freitas, A. Z., Aranha, A. C. C., & Zezell, D. M. (2019). Using Optical Attenuation Coefficient to Monitor the Efficacy of Fluoride and Nd:YAG Laser to Control Dentine Erosion. APPLIED SCIENCES-BASEL, 9(7). doi:10.3390/app9071485
Label-free infrared spectroscopic imaging for characterization of necrotic tissue areas on cutaneous squamous cell carcinoma
Lima, C. A., Correa, L., Byrne, H., & Zezell, D. M. (2019). Label-free infrared spectroscopic imaging for characterization of necrotic tissue areas on cutaneous squamous cell carcinoma. In A. Mahadevan-Jansen (Ed.), Advanced Biomedical and Clinical Diagnostic and Surgical Guidance Systems XVII (pp. 28). SPIE. doi:10.1117/12.2510711
K-means and Hierarchical Cluster Analysis as segmentation algorithms of FTIR hyperspectral images collected from cutaneous tissue
Lima, C., Correa, L., Byrne, H., & Zezell, D. (2018). K-means and Hierarchical Cluster Analysis as segmentation algorithms of FTIR hyperspectral images collected from cutaneous tissue. In 2018 SBFoton International Optics and Photonics Conference (SBFoton IOPC) (pp. 1-4). IEEE. doi:10.1109/sbfoton-iopc.2018.8610920
2018
Vibrational spectra calculation of squamous cell carcinoma in the amide band region
Bortoletto, D. R., Lima, C. A., Zezell, D., Sato, E. T., & Martinho, H. (2018). Vibrational spectra calculation of squamous cell carcinoma in the amide band region. VIBRATIONAL SPECTROSCOPY, 97, 135-139. doi:10.1016/j.vibspec.2018.06.007
Diagnosis of advanced skin cancer using Infrared spectral histopathology
Lima, C. A., Correa, L., Byrne, H. J., & Zezell, D. M. (2018). Diagnosis of advanced skin cancer using Infrared spectral histopathology. In Latin America Optics and Photonics Conference (pp. Tu3C.3). OSA. doi:10.1364/laop.2018.tu3c.3
Discrimination of Healthy Skin and Cutaneous Malignant Lesions using FTIR Spectra and their Second Derivatives: A Comparative Study
Zezell, D. M., & Lima, C. (2018). Discrimination of Healthy Skin and Cutaneous Malignant Lesions using FTIR Spectra and their Second Derivatives: A Comparative Study. In Biophotonics Congress: Biomedical Optics Congress 2018 (Microscopy/Translational/Brain/OTS) (pp. JTu3A.42). OSA. doi:10.1364/translational.2018.jtu3a.42
FTIR spectroscopy: an optical method to study wound healing process
Castro, P., Lima, C., Zorn, T. M. T., & Zezell, D. M. (2018). FTIR spectroscopy: an optical method to study wound healing process. In Latin America Optics and Photonics Conference (pp. Th4A.42). OSA. doi:10.1364/laop.2018.th4a.42
2016
Optimization and therapeutic effects of PDT mediated by ALA and MAL in the treatment of cutaneous malignant lesions: A comparative study
Lima, C. A., Goulart, V. P., Henriques Bechara, E. J., Correa, L., & Zezell, D. M. (2016). Optimization and therapeutic effects of PDT mediated by ALA and MAL in the treatment of cutaneous malignant lesions: A comparative study. Journal of Biophotonics, 9(11-12), 1355-1361. doi:10.1002/jbio.201600164
ATR-FTIR spectroscopy and multivariate analysis for thermal burned skin classification
Castro, P. A., Lima, C. A., Santos, M. O., & Zezell, D. M. (2016). ATR-FTIR spectroscopy and multivariate analysis for thermal burned skin classification. In Latin America Optics and Photonics Conference (pp. LTu4A.29). OSA. doi:10.1364/laop.2016.ltu4a.29
Chemometric methods applied to FTIR spectra to discriminate treated and non-treated cutaneous malignant lesions from healthy skin
Lima, C., Goulart, V., & Zezell, D. M. (2016). Chemometric methods applied to FTIR spectra to discriminate treated and non-treated cutaneous malignant lesions from healthy skin. In Latin America Optics and Photonics Conference (pp. LW2D.4). OSA. doi:10.1364/laop.2016.lw2d.4
Using Fourier transform infrared spectroscopy to evaluate biological effects induced by photodynamic therapy
Lima, C. A., Goulart, V. P., Correa, L., & Zezell, D. M. (2016). Using Fourier transform infrared spectroscopy to evaluate biological effects induced by photodynamic therapy. LASERS IN SURGERY AND MEDICINE, 48(5), 538-545. doi:10.1002/lsm.22473
2015
Biochemical changes in cutaneous squamous cell carcinoma submitted to PDT using ATR-FTIR spectroscopy
Lima, C. A., Goulart, V. P., de Castro, P. A. A., Correa, L., Benetti, C., & Zezell, D. M. (2015). Biochemical changes in cutaneous squamous cell carcinoma submitted to PDT using ATR-FTIR spectroscopy. In BIOPHOTONICS SOUTH AMERICA Vol. 9531. doi:10.1117/12.2181067
ATR-FTIR Spectroscopy for the Assessment of Biochemical Changes in Skin Due to Cutaneous Squamous Cell Carcinoma
Lima, C. A., Goulart, V. P., Correa, L., Pereira, T. M., & Zezell, D. M. (2015). ATR-FTIR Spectroscopy for the Assessment of Biochemical Changes in Skin Due to Cutaneous Squamous Cell Carcinoma. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 16(4), 6621-6630. doi:10.3390/ijms16046621
Caracterização bioquímica de lesões neoplásicas via espectroscopia de absorção no infravermelho por transformada de Fourier
Lima, C. A. (n.d.). Caracterização bioquímica de lesões neoplásicas via espectroscopia de absorção no infravermelho por transformada de Fourier. doi:10.11606/d.85.2015.tde-28082015-100900
BIOCHEMICAL CHANGES IN NORMAL SKIN CAUSED BY SQUAMOUS CELL CARCINOMA USING FTIR SPECTROSCOPY
Lima, C., Goulart, V., Correa, L., & Zezell, D. (2015). BIOCHEMICAL CHANGES IN NORMAL SKIN CAUSED BY SQUAMOUS CELL CARCINOMA USING FTIR SPECTROSCOPY. In LASERS IN SURGERY AND MEDICINE Vol. 47 (pp. 2). Retrieved from https://www.webofscience.com/
2014
Evaluation of squamous cell skin carcinoma using ATR-FTIR spectroscopy associated to cluster analysis
Lima, C. A., Goulart, V., & Zezell, D. M. (2014). Evaluation of squamous cell skin carcinoma using ATR-FTIR spectroscopy associated to cluster analysis. In Latin America Optics and Photonics Conference (pp. LTh4A.24). OSA. doi:10.1364/laop.2014.lth4a.24