Marie Curie Host Fellowships for Early Stage Training (EST)
sensing and the biological response to the environment in plants
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Marie Curie Host Fellowships for Early Stage Training (EST) |
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sensing and the biological response to the environment in plants |
three year and six month Fellowships from October 2006 | |
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Recent publications from Integrative Biology Research Group
2006
Gould, P.D., Locke, J.C.W., Larue, C., Southern, M. M., Davis, S.J., Hanano, S., Putteril, J., Millar A.J. and Hall, A. (2006) The molecular basis of temperature compensation in the Arabidopsis circadian clock. The Plant Cell 18 1177-1187 This was Featured Paper of the Month in Plant Cell: A Wheel within a Wheel: Temperature Compensation of the Circadian Clock, commentary by Nancy A. Eckardt, News and Reviews Editor.
Darrah, C., Taylor, B.L., Edwards, K. D., Brown, P. E., Hall, A. and McWatters, H. G. (2006) Analysis of phase opf LUCIFERASE expression reveals novel circadian quantitative trait loci in Arabidopsis Plant Physiology 140 1464 - 1474 Kevei, E., Gyula, P., Hall, A., Kozma-Bognar, L., and 13 further co-authors (2006). Forward genetic analysis of the circadian clock seperates the multiple functions of ZEITLUPE. Plant Physiology 140 933 - 945 Edwards, K.D,. Anderson, P.E., Hall, A., Salathia, N.S., Locke, J.C.W., Lynn, J.R., Straume, M.,Smith, J.Q., and Millar A.J. (2006). FLOWERING LOCUS C mediates natural variation in the high-temperature response of the Arabidopsis circadian clock Plant Cell 18 639-650 Berger, H., Pachlinger, R., Morozov, I., Goller, S., Narendja, F., Caddick, M.X. and Strauss, J. (2006) The GATA factor AreA regulates localization and in vivo binding site occupancy of the nitrate activator NirAMolecular Microbiology 59 433-446 Bates, A.D., Callan, B., Cooper, M.J., Cosstick, R., Geary, C., Glidle. A., Jaeger, L., Pearson, J.L., Proupín-Pérez, M., Xu, C. and D. R. S. Cumming (2006) Construction and characterization of a gold nanoparticle wire assembled using Mg2+-dependent RNA-RNA interactions Nano Letters 6 445-448 AD Bates (2006) DNA topoisomerases: Single gyrase caught in the act Current Biology 16 R204-R206 van Zalinge, H., Schiffrin, D.J., Bates, A.D., Haiss, W., Ulstrup, J. and Nichols, R.J. (2006) Single-molecule conductance measurements of single- and double-stranded DNA oligonucleoticles ChemPhysChem 7 (1) 94-98 2005 Bates, A.
D. and Maxwell, A. (2005).
DNA Topology (2nd edition) Oxford University Press, Oxford.
Boxall S.F., Foster J.M., Bohnert
H.J., Cushman, J.C., Nimmo H.G., Hartwell J.
(2005) Conservation
and divergence of circadian clock operation in a stress-inducible crassulacean
acid metabolism species reveals clock compensation against stress.
Plant Physiology,
137 969-982 Crowther
T., Collin H.A., Smith, B., Tomsett, A. B., O’Connor D., Jones M.G. (2005)
Assessment of
the flavour of fresh uncooked onions by taste-panels and analysis of flavour
precursors, pyruvate and sugars. Journal of the Science of Food and
Agriculture, 85 112 - 120
Dodd AN,
Salathia N,
Hall A,
Kevei E,
Toth R,
Nagy F,
Hibberd JM,
Millar AJ,
Webb AAR
(2005)
Plant
circadian clocks increase photosynthesis, growth, survival, and competitive
advantage. Science 309 630-633 Fitzgibbon G. J., Morozov I.Y. , Jones M.G., Caddick M.X.
(2005) Genetic
analysis of the TOR pathway in Aspergillus nidulans. Eukaryotic
Cell 4 1595 - 1598 Galagan, J.E.,
Caddick, M.X. and 28 co-authors (2005)
Sequencing of Aspergillus nidulans and comparative
analysis with A. fumigatus and A. oryzae. Nature
438 1105 - 1115.
Garoosi G.A.,
Salter M.G.,
Caddick M.X.,
Tomsett A.B.
(2005)
Characterization of the ethanol-inducible alc gene expression system in tomato.
Journal of Experimental Botany 56 1635-1642 Hall, A. and McWatters, H. (2005)
Endogenous
Plant Rhythms (editors) Annual Plant Reviews 21, Blackwell Synergy Hartwell, J (2005)
The
circadian clock in CAM plants in Endogenous Plant Rhythms (eds. A.
Hall and H McWatters), Blackwell Synergy Hartwell, J (2005) The co-ordination of central plant metabolism by the circadian clock. Biochemical Society Transactions 33 945 - 948 Maxwell, A., Costenaro, L., Mitelheiser, S. and Bates, A.D. (2005) Coupling ATP hydrolysis to DNA strand passage in type IIA DNA topoisomerases. Biochem. Soc. Trans., 33 1460-1464. Roberts, G. R., Garoosi, G. A., Koroleva, O., Ito, M., Laufs, P.,
Leader, D. J., Caddick, M. X., Doonan, J. H., Tomsett, A. B. (2005)
The alc-GR System. A Modified alc Gene Switch Designed for Use in Plant Tissue
Culture. Plant Physiology 138, 1259-1267 Tuong, To. T., Bouman, B.A.M. and Mortimer, M. (2005)
More rice,
less water - integrated approaches for increasing water productivity in
irrigated rice-based systems in Asia. Plant Production Science
8 231 - 241 2004
Caddick, M.X.
(2004)
Nitrogen regulation in mycelial fungi.
in The Mycota
III, Biochemistry and Molecular Biology, 2nd Edition, (eds R. Brambl and G
A Marzluf) Springer-Verlag Berlin-Heidelberg.
Jones M.G., Hughes J., Tregova
A., Milne J., Tomsett A.B., Collin H.A. (2004)
Biosynthesis of the flavour
precursors of onion and garlic. Journal of Experimental Botany, 55
1903-1918.
McArdle F Spiers S Aldemir H Vasilaki A Beaver A Iwanejko L McArdle A Jackson M.J (2004)
Preconditioning of skeletal muscle against contraction-induced damage: the role
of adaptations to oxidants in mice. Journal of Physiology, 561
233-244
Tomsett, A.B., Tregova, A., Garoosi A., Caddick M.X.
(2004)
Ethanol-inducible gene expression: first step towards a new green revolution?
(2004) Trends in Plant Science, 9 159-161 Wang, Z., Kanaras, A., Bates, A., Cosstick, R. and Brust, M. (2004) Enzymatic DNA processing on gold nanoparticles. J. Mater. Chem. 14 578-580.
2003
Caton B.P., Cope, A.E., Mortimer A.M. (2003)
Growth traits
of diverse rice cultivars under severe competition: implications for screening
for competitiveness. Field Crops Research, 83 157 - 172.
Hall A., Bastow R.M., Davis S.J.,
Hanano S., McWatters H.G., Hibberd V., Doyle M.R., Millar A.J. (2003)
The Time
for Coffee Gene maintains the amplitude and timing of Arabidopsis circadian
clocks. Plant Cell, 15 2719-2729.
Haq M.A., Collin, H.A., Tomsett, A.B, Jones M.G. (2003)
Detection of
Sclerotium cepivorum within onion plants using PCR primers.
Physiological and Molecular Plant Pathology 62, 185 - 189
Kanaras, A., Wang, Z., Bates, A., Cosstick, R., Brust, M.
(2003). Towards multistep nanostructure synthesis: programmed enzymatic
self-assembly of DNA/gold systems. Angew. Chem. Int. Ed. 42,
191-194.
Marsh, J.T., Sullivan, S., Hartwell, J. and Nimmo, H.G. (2003) Structure and expression of phosphoenolpyruvate carboxylase kinase genes in Solanaceae: a novel gene exhibits alternative splicing. Plant Physiology. 133 2021-2028.
2002
Fontaine, V., Hartwell, J., Jenkins, G.I. and Nimmo, H.G. (2002) Arabidopsis thaliana contains two phosphoenolpyruvate carboxylase kinase genes with different expression patterns. Plant, Cell and Environment. 25 115-122.
Hartwell J., Nimmo G.A., Wilkins M.B., Jenkins G.I., Nimmo
H.G. (2002) Probing the circadian control of phosphoenolpyruvate carboxylase
kinase expression in Kalanchoë fedtschenkoi. Functional Plant Biology,
29 663-668.
Havey M.J., Cantwell M., Jones
M.G., Jones R.W., Schmidt N.E., Uhlig J., Watson J.F., Sun Yoo K. (2002)
Significant variation exists among laboratories measuring onion bulb quality
traits. HortScience, 37 1086-1087.
2001
Morozov I.Y., Galbis Martinez M., Jones M.G., Caddick M.X.
(2001)
Characterisation of nitrogen metabolite signalling in Aspergillus via the
regulated degradation of areA mRNA. Molecular Microbiology 42
(1) 269 - 277.
Nimmo, H.G., Fontaine, V., Hartwell, J., Jenkins, G.I., Nimmo, G.A. and Wilkins, M.B. (2001) PEP carboxylase kinase is a novel protein kinase controlled at the level of expression. New Phytologist. 151 91-97.
Roslan, H.A., Salter, M.G., Wood, C.D., White,
M.R.H., Croft, K.P., Robson, F., Coupland, G., Doonan, J.H., Laufs, P.,
Tomsett A.B., Caddick M.X. (2001)
Characterisation of the ethanol inducible alc gene expression system in
Arabidopsis thaliana. The Plant Journal 28 225 - 237
Significant earlier publications
Begon, M, Mortimer, A.M., & Thompson, D.J (1996)
Population Ecology: A unified study of animals and plants. (3rd
edition) Blackwell Science Ltd. London.
Caddick M.X., Greenland A.J.,
Jepson I., Krause K.-P., Qu N., Riddell K.V., Salter M.G., Tomsett A.B.
An
ethanol inducible gene switch for plants used to manipulate carbon metabolism.
(1998) Nature Biotechnology, 16 177-180.
Hartwell, J., Gill, A., Nimmo, G.A., Wilkins, M.B., Jenkins, G.I. and Nimmo, H.G. (1999) Phosphoenolpyruvate carboxylase kinase is a novel protein kinase regulated at the level of expression. Plant Journal 20 333-342.
Smith K.N., Iwanejko L.,
Loeillet S., Fabre F., Nicolas A. (1999)
Disruption and functional analysis of
seven ORFs on chromosome IV: YDL057w, YDL012c, YDL010w, YDL009c, YDL008w
(APC11), YDL005c (MED2) and YDL003w (MCD1). Yeast, 15 1255-1267.
Toth R., Kevei E., Hall A.,
Millar A.J., Nagy F., Kozma-Bognar L. (2001)
Circadian clock-regulated
expression of phytochrome and cryptochrome genes in Arabidopsis. Plant
Physiology, 127 1607-1616.