2022
Charoensawan, V., Cortijo, S., Domijan, M., & Negrao, S. (2022). Editorial: Multi-Disciplinary Approaches to Plant Responses to Climate Change. FRONTIERS IN PLANT SCIENCE, 13. doi:10.3389/fpls.2022.876432DOI: 10.3389/fpls.2022.876432
2021
NRF2/KEAP1 pathway is required to fine-tune circadian oscillations as part of the negative feedback loop of the molecular clock: implications for tissue homeostasis and therapeutic interventions (Conference Paper)
Sutton, E., Early, J., Hughes, A., Gall, L., Carter, A., Copple, I., . . . Pekovic-Vaughan, V. (2021). NRF2/KEAP1 pathway is required to fine-tune circadian oscillations as part of the negative feedback loop of the molecular clock: implications for tissue homeostasis and therapeutic interventions. In FREE RADICAL BIOLOGY AND MEDICINE Vol. 177. doi:10.1016/j.freeradbiomed.2021.08.042DOI: 10.1016/j.freeradbiomed.2021.08.042
Vimont, N., Schwarzenberg, A., Domijan, M., Donkpegan, A. S. L., Beauvieux, R., le Dantec, L., . . . Wenden, B. (2021). Fine tuning of hormonal signaling is linked to dormancy status in sweet cherry flower buds. TREE PHYSIOLOGY, 41(4), 544-561. doi:10.1093/treephys/tpaa122DOI: 10.1093/treephys/tpaa122
2019
Greenwood, M., Domijan, M., Gould, P. D., Hall, A. J. W., & Locke, J. C. W. (2019). Coordinated circadian timing through the integration of local inputs in Arabidopsis thaliana. PLOS BIOLOGY, 17(8). doi:10.1371/journal.pbio.3000407DOI: 10.1371/journal.pbio.3000407
Introduction to MATLAB® for Biologists (Book)
Webb, C. R., & Domijan, M. (2019). Introduction to MATLAB® for Biologists. Springer International Publishing. doi:10.1007/978-3-030-21337-4DOI: 10.1007/978-3-030-21337-4
2018
Hajdu, A., Dobos, O., Domijan, M., Balint, B., Nagy, I., Nagy, F., & Kozma-Bognar, L. (2018). ELONGATED HYPOCOTYL 5 mediates blue light signalling to the Arabidopsis circadian clock. PLANT JOURNAL, 96(6), 1242-1254. doi:10.1111/tpj.14106DOI: 10.1111/tpj.14106
Vimont, N., Schwarzenberg, A., Domijan, M., Donkpegan, A. S. L., Beauvieux, R., le Dantec, L., . . . Wenden, B. (2018). Fine tuning of hormonal signaling is linked to dormancy status in sweet cherry flower buds. doi:10.1101/423871DOI: 10.1101/423871
Gould, P. D., Domijian, M., Greenwood, M., Tokuda, I. T., Rees, H., Kozma-Bognar, L., . . . Locke, J. C. W. (2018). Coordination of robust single cell rhythms in the Arabidopsis circadian clock via spatial waves of gene expression. ELIFE, 7. doi:10.7554/eLife.31700DOI: 10.7554/eLife.31700
2017
Coordination of robust single cell rhythms in the <i>Arabidopsis</i> circadian clock via spatial waves of gene expression (Journal article)
Gould, P., Domijan, M., Greenwood, M., Tokuda, I., Rees, H., Kozma-Bognar, L., . . . Locke, J. C. W. (2017). Coordination of robust single cell rhythms in the <i>Arabidopsis</i> circadian clock via spatial waves of gene expression. doi:10.1101/208900DOI: 10.1101/208900
2016
Jung, J. -H., Domijan, M., Klose, C., Biswas, S., Ezer, D., Gao, M., . . . Wigge, P. A. (2016). Phytochromes function as thermosensors in Arabidopsis. Science, 354(6314), 886-889. doi:10.1126/science.aaf6005DOI: 10.1126/science.aaf6005
PeTTSy: a computational tool for perturbation analysis of complex systems biology models. (Journal article)
Domijan, M., Brown, P. E., Shulgin, B. V., & Rand, D. A. (2016). PeTTSy: a computational tool for perturbation analysis of complex systems biology models. BMC Bioinformatics, 17. doi:10.1186/s12859-016-0972-2DOI: 10.1186/s12859-016-0972-2
2015
Using constraints and their value for optimization of large ODE systems. (Journal article)
Domijan, M., & Rand, D. A. (2015). Using constraints and their value for optimization of large ODE systems. JOURNAL OF THE ROYAL SOCIETY INTERFACE, 12(104), 1-11. doi:10.1098/rsif.2014.1303DOI: 10.1098/rsif.2014.1303
ELF3 controls thermoresponsive growth in Arabidopsis. (Journal article)
Box, M. S., Huang, B. E., Domijan, M., Jaeger, K. E., Khattak, A. K., Yoo, S. J., . . . Wigge, P. A. (2015). ELF3 Controls Thermoresponsive Growth in Arabidopsis. CURRENT BIOLOGY, 25(2), 194-199. doi:10.1016/j.cub.2014.10.076DOI: 10.1016/j.cub.2014.10.076
2013
Network balance <i>via</i> CRY signalling controls the <i>Arabidopsis</i> circadian clock over ambient temperatures (Journal article)
Gould, P. D., Ugarte, N., Domijan, M., Costa, M., Foreman, J., MacGregor, D., . . . Hall, A. J. W. (2013). Network balance <i>via</i> CRY signalling controls the <i>Arabidopsis</i> circadian clock over ambient temperatures. MOLECULAR SYSTEMS BIOLOGY, 9. doi:10.1038/msb.2013.7DOI: 10.1038/msb.2013.7
2012
The interaction graph structure of mass-action reaction networks. (Journal article)
Domijan, M., & Pécou, E. (2012). The interaction graph structure of mass-action reaction networks.. Journal of mathematical biology, 65(2), 375-402. doi:10.1007/s00285-011-0462-0DOI: 10.1007/s00285-011-0462-0
2011
Domijan, M., & Rand, D. A. (2011). Balance equations can buffer noisy and sustained environmental perturbations of circadian clocks.. Interface focus, 1(1), 177-186. doi:10.1098/rsfs.2010.0007DOI: 10.1098/rsfs.2010.0007
2009
Bistability and oscillations in chemical reaction networks. (Journal article)
Domijan, M., & Kirkilionis, M. (2009). Bistability and oscillations in chemical reaction networks.. Journal of mathematical biology, 59(4), 467-501. doi:10.1007/s00285-008-0234-7DOI: 10.1007/s00285-008-0234-7
A Definition of Cellular Interface Problems (Chapter)
Kirkilionis, M., Domijan, M., Eigel, M., George, E., Li, M., & Sbano, L. (2009). A Definition of Cellular Interface Problems. In Membrane Computing (pp. 36-62). Springer Berlin Heidelberg. doi:10.1007/978-3-540-95885-7_4DOI: 10.1007/978-3-540-95885-7_4
2008
Graph theory and qualitative analysis of reaction networks (Journal article)
Domijan, M., & Kirkilionis, M. (2008). Graph theory and qualitative analysis of reaction networks. Networks & Heterogeneous Media, 3(2), 295-322. doi:10.3934/nhm.2008.3.295DOI: 10.3934/nhm.2008.3.295
2006
Bistability in chemical reaction networks (Chapter)
Domijan, M. (2006). Bistability in chemical reaction networks. In M. Kirkilionis, U. Kummer, & I. Stoleriu (Eds.), 2nd UniNet Workshop: Data, Networks and Dynamics. Logos Verlag Berlin GmbH.
Dynamical Probing of the Mechanisms Underlying Calcium Oscillations (Journal article)
Domijan, M., Murray, R., & Sneyd, J. (2006). Dynamical Probing of the Mechanisms Underlying Calcium Oscillations. Journal of Nonlinear Science, 16(5), 483-506. doi:10.1007/s00332-005-0744-zDOI: 10.1007/s00332-005-0744-z
